DESCRIPTIONThis module reads the molecular data of a Sybly mol file and builds a Chemistry Pyramid. It is basically an implementation of the InterCon program written by Dr. Stuart Greene.
Filename of Sybyl mol file.
The output is a Chemical-based pyramid. This pyramid has 2 layers of lattices. The base layer (0) contains the bond order and 2 atom numbers that comprise the bond. The next layer (1), contains the connectivity information, atom data, and the cartesian coordinates. Eact atom has 4 data variables: ID, element number vdw radius, and colour number.
PROBLEMSOccasionally atoms are unconnected.
SEE ALSOMoleculeBuilder EyeBalls PrintPyr BallStick
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